SELECT 
  cscart_product_prices.product_id, 
  MIN(
    IF(
      cscart_product_prices.percentage_discount = 0, 
      cscart_product_prices.price, 
      cscart_product_prices.price - (
        cscart_product_prices.price * cscart_product_prices.percentage_discount
      )/ 100
    )
  ) AS price 
FROM 
  cscart_product_prices 
WHERE 
  cscart_product_prices.product_id IN (
    185427, 185417, 269958, 269940, 270142, 
    185428, 185406, 269931, 185408, 185431, 
    269959, 269964, 270144, 185389, 265428, 
    185390, 269978, 185401, 270132, 185426, 
    270133, 269983, 185432, 265408, 270023, 
    392330, 270131, 270134, 269965, 185420, 
    265401, 270017, 185430, 270015, 270087, 
    185410, 265420, 392264, 265465, 435508, 
    270057, 392324, 392270, 392314, 392272, 
    392325, 392273, 392329, 392317, 392326, 
    392332, 392333, 392335, 392313, 392319, 
    392328, 392323, 392262, 392320, 392316, 
    392271, 432460, 392331, 392266, 432542, 
    392268, 392274, 392275, 392327, 392321, 
    392334, 392322, 392315, 432333, 432589, 
    392312, 432449, 432642, 435503, 432353, 
    432668, 435523, 432523, 432251, 432652, 
    432688, 432320, 432694, 435520
  ) 
  AND cscart_product_prices.lower_limit = 1 
  AND cscart_product_prices.usergroup_id IN (0, 1) 
GROUP BY 
  cscart_product_prices.product_id

Query time 0.00377

JSON explain

{
  "query_block": {
    "select_id": 1,
    "cost_info": {
      "query_cost": "249.48"
    },
    "grouping_operation": {
      "using_filesort": false,
      "table": {
        "table_name": "cscart_product_prices",
        "access_type": "range",
        "possible_keys": [
          "usergroup",
          "product_id",
          "lower_limit",
          "usergroup_id"
        ],
        "key": "usergroup",
        "used_key_parts": [
          "product_id",
          "usergroup_id",
          "lower_limit"
        ],
        "key_length": "9",
        "rows_examined_per_scan": 178,
        "rows_produced_per_join": 178,
        "filtered": "100.00",
        "cost_info": {
          "read_cost": "213.88",
          "eval_cost": "35.60",
          "prefix_cost": "249.48",
          "data_read_per_join": "11K"
        },
        "used_columns": [
          "product_id",
          "price",
          "percentage_discount",
          "lower_limit",
          "usergroup_id"
        ],
        "attached_condition": "((`webmarco`.`cscart_product_prices`.`lower_limit` = 1) and (`webmarco`.`cscart_product_prices`.`product_id` in (185427,185417,269958,269940,270142,185428,185406,269931,185408,185431,269959,269964,270144,185389,265428,185390,269978,185401,270132,185426,270133,269983,185432,265408,270023,392330,270131,270134,269965,185420,265401,270017,185430,270015,270087,185410,265420,392264,265465,435508,270057,392324,392270,392314,392272,392325,392273,392329,392317,392326,392332,392333,392335,392313,392319,392328,392323,392262,392320,392316,392271,432460,392331,392266,432542,392268,392274,392275,392327,392321,392334,392322,392315,432333,432589,392312,432449,432642,435503,432353,432668,435523,432523,432251,432652,432688,432320,432694,435520)) and (`webmarco`.`cscart_product_prices`.`usergroup_id` in (0,1)))"
      }
    }
  }
}

Result

product_id price
185389 6.92000000
185390 6.92000000
185401 6.92000000
185406 6.92000000
185408 6.41000000
185410 6.92000000
185417 6.35000000
185420 6.45000000
185426 5.62000000
185427 6.07000000
185428 5.62000000
185430 6.07000000
185431 6.45000000
185432 6.07000000
265401 180.00000000
265408 230.00000000
265420 280.00000000
265428 320.00000000
265465 220.00000000
269931 200.00000000
269940 190.00000000
269958 270.00000000
269959 240.00000000
269964 320.00000000
269965 270.00000000
269978 240.00000000
269983 320.00000000
270015 350.00000000
270017 320.00000000
270023 220.00000000
270057 210.00000000
270087 180.00000000
270131 210.00000000
270132 210.00000000
270133 180.00000000
270134 210.00000000
270142 210.00000000
270144 210.00000000
392262 160.00000000
392264 150.00000000
392266 115.00000000
392268 120.00000000
392270 210.00000000
392271 180.00000000
392272 175.00000000
392273 120.00000000
392274 130.00000000
392275 140.00000000
392312 110.00000000
392313 180.00000000
392314 200.00000000
392315 120.00000000
392316 130.00000000
392317 130.00000000
392319 50.00000000
392320 0.00000000
392321 50.00000000
392322 69.00000000
392323 74.00000000
392324 74.00000000
392325 80.00000000
392326 80.00000000
392327 100.00000000
392328 269.00000000
392329 289.00000000
392330 99.00000000
392331 179.00000000
392332 130.00000000
392333 115.00000000
392334 130.00000000
392335 130.00000000
432251 7.00000000
432320 15.00000000
432333 10.00000000
432353 14.00000000
432449 31.00000000
432460 25.50000000
432523 24.00000000
432542 31.50000000
432589 28.50000000
432642 46.50000000
432652 5.50000000
432668 5.50000000
432688 5.50000000
432694 5.50000000
435503 10.00000000
435508 100.00000000
435520 0.00000000
435523 100.00000000