SELECT 
  cscart_product_prices.product_id, 
  MIN(
    IF(
      cscart_product_prices.percentage_discount = 0, 
      cscart_product_prices.price, 
      cscart_product_prices.price - (
        cscart_product_prices.price * cscart_product_prices.percentage_discount
      )/ 100
    )
  ) AS price 
FROM 
  cscart_product_prices 
WHERE 
  cscart_product_prices.product_id IN (
    264226, 264884, 264885, 264886, 264887, 
    264888, 264889, 264890, 264891, 264892, 
    264893, 264894, 264895, 264896, 264897
  ) 
  AND cscart_product_prices.lower_limit = 1 
  AND cscart_product_prices.usergroup_id IN (0, 1) 
GROUP BY 
  cscart_product_prices.product_id

Query time 0.00156

JSON explain

{
  "query_block": {
    "select_id": 1,
    "cost_info": {
      "query_cost": "42.05"
    },
    "grouping_operation": {
      "using_filesort": false,
      "table": {
        "table_name": "cscart_product_prices",
        "access_type": "range",
        "possible_keys": [
          "usergroup",
          "product_id",
          "lower_limit",
          "usergroup_id"
        ],
        "key": "usergroup",
        "used_key_parts": [
          "product_id",
          "usergroup_id",
          "lower_limit"
        ],
        "key_length": "9",
        "rows_examined_per_scan": 30,
        "rows_produced_per_join": 30,
        "filtered": "100.00",
        "cost_info": {
          "read_cost": "36.06",
          "eval_cost": "6.00",
          "prefix_cost": "42.06",
          "data_read_per_join": "1K"
        },
        "used_columns": [
          "product_id",
          "price",
          "percentage_discount",
          "lower_limit",
          "usergroup_id"
        ],
        "attached_condition": "((`webmarco`.`cscart_product_prices`.`lower_limit` = 1) and (`webmarco`.`cscart_product_prices`.`product_id` in (264226,264884,264885,264886,264887,264888,264889,264890,264891,264892,264893,264894,264895,264896,264897)) and (`webmarco`.`cscart_product_prices`.`usergroup_id` in (0,1)))"
      }
    }
  }
}

Result

product_id price
264226 31.48000000
264884 31.48000000
264885 31.48000000
264886 31.48000000
264887 31.48000000
264888 31.48000000
264889 31.48000000
264890 31.48000000
264891 31.48000000
264892 31.48000000
264893 31.48000000
264894 31.48000000
264895 31.48000000
264896 31.48000000
264897 31.48000000